BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F03SP1|AL426709
(767 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig344 1520 0.0
>3x_Contig344
Length = 1970
Score = 1520 bits (767), Expect = 0.0
Identities = 767/767 (100%)
Strand = Plus / Plus
Query: 1 gatcttcaagtaaagtgttcaaagtagcgaattgtccctgtagctctactgaatagcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 gatcttcaagtaaagtgttcaaagtagcgaattgtccctgtagctctactgaatagcttg 1238
Query: 61 tatataggttgttgaatttatcccagtttcgctttaacaattcggaaggaatgttaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 tatataggttgttgaatttatcccagtttcgctttaacaattcggaaggaatgttaaact 1298
Query: 121 gctgctggtttaattttaggtgaaaatcgacattaggttcgtttaacgaagtcataatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 gctgctggtttaattttaggtgaaaatcgacattaggttcgtttaacgaagtcataatga 1358
Query: 181 catctaaaggctttttggtagatttaccgtcaccagtattacactgattgatccagtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 catctaaaggctttttggtagatttaccgtcaccagtattacactgattgatccagtttg 1418
Query: 241 tcagttatttggttcatccctaaagattaaggtatattgtgaaaacccctttcaattttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 tcagttatttggttcatccctaaagattaaggtatattgtgaaaacccctttcaattttc 1478
Query: 301 ttatgcaatttgatgcagaaatacaaagatatagttaccatgaatgaaatacatcaaccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 ttatgcaatttgatgcagaaatacaaagatatagttaccatgaatgaaatacatcaaccg 1538
Query: 361 gtacgctggaaaaaaaaaattgctaaagtcgagttgatgcagtaccaactggagggtagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 gtacgctggaaaaaaaaaattgctaaagtcgagttgatgcagtaccaactggagggtagg 1598
Query: 421 aatatcaggcgaaacattacagacgtttgtttatacactgttagtgaaaagataaatacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 aatatcaggcgaaacattacagacgtttgtttatacactgttagtgaaaagataaatacc 1658
Query: 481 aatggctaagtgttgcgcctaaagtttaagacccagaaagcatcaaacagacgaggacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 aatggctaagtgttgcgcctaaagtttaagacccagaaagcatcaaacagacgaggacag 1718
Query: 541 aatatattacattttaataattttatttagaaagctccttgctcataatctagccaagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 aatatattacattttaataattttatttagaaagctccttgctcataatctagccaagaa 1778
Query: 601 agaatgattggaaccattgaatgatttaactgcgagatgctgaactggtcatacaaaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1779 agaatgattggaaccattgaatgatttaactgcgagatgctgaactggtcatacaaaaag 1838
Query: 661 tgtgatatacacacaacttaccataataataagaccgtaccagactaatgccagacttcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1839 tgtgatatacacacaacttaccataataataagaccgtaccagactaatgccagacttcc 1898
Query: 721 atatctgtgagctttatcccatcctccgattctctcaccgttcatca 767
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1899 atatctgtgagctttatcccatcctccgattctctcaccgttcatca 1945
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7139
Number of Sequences: 1807
Number of extensions: 7139
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 767
length of database: 10,358,551
effective HSP length: 16
effective length of query: 751
effective length of database: 10,329,639
effective search space: 7757558889
effective search space used: 7757558889
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)